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Cluster: HRGMv2_2270_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_2 HRGMv2_2270_2_180 235191 235925 + 8.A.3.2.3
TC HRGMv2_2270_2 HRGMv2_2270_2_181 235926 236714 + 8.A.3.2.3
TC HRGMv2_2270_2 HRGMv2_2270_2_182 236732 238651 + 9.B.18.2.1
pfam HRGMv2_2270_2 HRGMv2_2270_2_183 238883 239407 + NusG
pfam HRGMv2_2270_2 HRGMv2_2270_2_184 239439 240725 + DegT_DnrJ_EryC1
TC HRGMv2_2270_2 HRGMv2_2270_2_185 240753 241403 + 9.B.18.1.2
pfam HRGMv2_2270_2 HRGMv2_2270_2_186 241400 242005 + PglD_N
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_187 242002 243150 + GT4
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_188 243174 244346 + GT4
Gene ID: HRGMv2_2270_2_180
Type: TC
Location: 235191 - 235925 (+)
Gene ID: HRGMv2_2270_2_181
Type: TC
Location: 235926 - 236714 (+)
Gene ID: HRGMv2_2270_2_182
Type: TC
Location: 236732 - 238651 (+)
Gene ID: HRGMv2_2270_2_183
Type: pfam
Location: 238883 - 239407 (+)
Gene ID: HRGMv2_2270_2_184
Type: pfam
Location: 239439 - 240725 (+)
Gene ID: HRGMv2_2270_2_185
Type: TC
Location: 240753 - 241403 (+)
Gene ID: HRGMv2_2270_2_186
Type: pfam
Location: 241400 - 242005 (+)
Gene ID: HRGMv2_2270_2_187
Type: CAZyme
Location: 242002 - 243150 (+)
Gene ID: HRGMv2_2270_2_188
Type: CAZyme
Location: 243174 - 244346 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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