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Cluster: HRGMv2_2270_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_117 152963 154015 + GH179
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_118 154012 156261 + GH65
STP HRGMv2_2270_2 HRGMv2_2270_2_119 156243 157316 + Diacid_rec
STP HRGMv2_2270_2 HRGMv2_2270_2_120 157435 158784 + SBP_bac_1
TC HRGMv2_2270_2 HRGMv2_2270_2_121 158816 160009 + 3.A.1.1.20
TC HRGMv2_2270_2 HRGMv2_2270_2_122 160006 161049 + 3.A.1.1.33
TC HRGMv2_2270_2 HRGMv2_2270_2_123 161060 162166 + 3.A.1.1.22
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_124 162228 164897 + GH38
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_125 164901 166583 + GH13_18
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_126 166609 168258 + GH63
pfam HRGMv2_2270_2 HRGMv2_2270_2_127 168295 168903 + Lipase_GDSL | Lipase_GDSL_2
TF HRGMv2_2270_2 HRGMv2_2270_2_128 168969 170096 + LacI
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_129 170440 172419 + GH127
TC HRGMv2_2270_2 HRGMv2_2270_2_130 172475 173854 + 3.A.1.1.34
TC HRGMv2_2270_2 HRGMv2_2270_2_131 173892 174776 + 3.A.1.1.34
TC HRGMv2_2270_2 HRGMv2_2270_2_132 174778 175635 + 3.A.1.1.34
CAZyme HRGMv2_2270_2 HRGMv2_2270_2_133 175657 176616 + GH43_26
NULL(UNKNOWN) HRGMv2_2270_2 HRGMv2_2270_2_134 177708 177986 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2270_2 HRGMv2_2270_2_135 178079 179140 + 2.A.86.1.3
Gene ID: HRGMv2_2270_2_117
Type: CAZyme
Location: 152963 - 154015 (+)
Gene ID: HRGMv2_2270_2_118
Type: CAZyme
Location: 154012 - 156261 (+)
Gene ID: HRGMv2_2270_2_119
Type: STP
Location: 156243 - 157316 (+)
Gene ID: HRGMv2_2270_2_120
Type: STP
Location: 157435 - 158784 (+)
Gene ID: HRGMv2_2270_2_121
Type: TC
Location: 158816 - 160009 (+)
Gene ID: HRGMv2_2270_2_122
Type: TC
Location: 160006 - 161049 (+)
Gene ID: HRGMv2_2270_2_123
Type: TC
Location: 161060 - 162166 (+)
Gene ID: HRGMv2_2270_2_124
Type: CAZyme
Location: 162228 - 164897 (+)
Gene ID: HRGMv2_2270_2_125
Type: CAZyme
Location: 164901 - 166583 (+)
Gene ID: HRGMv2_2270_2_126
Type: CAZyme
Location: 166609 - 168258 (+)
Gene ID: HRGMv2_2270_2_127
Type: pfam
Location: 168295 - 168903 (+)
Gene ID: HRGMv2_2270_2_128
Type: TF
Location: 168969 - 170096 (+)
Gene ID: HRGMv2_2270_2_129
Type: CAZyme
Location: 170440 - 172419 (+)
Gene ID: HRGMv2_2270_2_130
Type: TC
Location: 172475 - 173854 (+)
Gene ID: HRGMv2_2270_2_131
Type: TC
Location: 173892 - 174776 (+)
Gene ID: HRGMv2_2270_2_132
Type: TC
Location: 174778 - 175635 (+)
Gene ID: HRGMv2_2270_2_133
Type: CAZyme
Location: 175657 - 176616 (+)
Gene ID: HRGMv2_2270_2_134
Type:
Location: 177708 - 177986 (+)
Gene ID: HRGMv2_2270_2_135
Type: TC
Location: 178079 - 179140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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