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Cluster: HRGMv2_2270_CGC119

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_71 HRGMv2_2270_71_1 38 1486 - 3.A.1.132.9
pfam HRGMv2_2270_71 HRGMv2_2270_71_2 1483 3072 - HATPase_c_5
CAZyme HRGMv2_2270_71 HRGMv2_2270_71_3 3149 3493 - GH38
TC HRGMv2_2270_71 HRGMv2_2270_71_4 4225 5484 - 3.A.1.1.48
TF HRGMv2_2270_71 HRGMv2_2270_71_5 5563 6477 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2270_71 HRGMv2_2270_71_6 6494 7573 - GH105
NULL(UNKNOWN) HRGMv2_2270_71 HRGMv2_2270_71_7 7566 10094 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2270_71 HRGMv2_2270_71_8 10109 10942 - 3.A.1.1.39
TC HRGMv2_2270_71 HRGMv2_2270_71_9 10932 11807 - 3.A.1.1.20
TF HRGMv2_2270_71 HRGMv2_2270_71_10 12180 13016 - MerR
TC HRGMv2_2270_71 HRGMv2_2270_71_11 13205 14584 + 2.A.66.1.37
Gene ID: HRGMv2_2270_71_1
Type: TC
Location: 38 - 1486 (-)
Gene ID: HRGMv2_2270_71_2
Type: pfam
Location: 1483 - 3072 (-)
Gene ID: HRGMv2_2270_71_3
Type: CAZyme
Location: 3149 - 3493 (-)
Gene ID: HRGMv2_2270_71_4
Type: TC
Location: 4225 - 5484 (-)
Gene ID: HRGMv2_2270_71_5
Type: TF
Location: 5563 - 6477 (-)
Gene ID: HRGMv2_2270_71_6
Type: CAZyme
Location: 6494 - 7573 (-)
Gene ID: HRGMv2_2270_71_7
Type:
Location: 7566 - 10094 (-)
Gene ID: HRGMv2_2270_71_8
Type: TC
Location: 10109 - 10942 (-)
Gene ID: HRGMv2_2270_71_9
Type: TC
Location: 10932 - 11807 (-)
Gene ID: HRGMv2_2270_71_10
Type: TF
Location: 12180 - 13016 (-)
Gene ID: HRGMv2_2270_71_11
Type: TC
Location: 13205 - 14584 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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