Cluster: HRGMv2_2270_CGC117
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_1 | 2 | 3925 | - | GH136 |
| NULL(UNKNOWN) | HRGMv2_2270_67 | HRGMv2_2270_67_2 | 3943 | 4722 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2270_67 | HRGMv2_2270_67_3 | 5121 | 5888 | + | 3.A.1.17.8 |
| TC | HRGMv2_2270_67 | HRGMv2_2270_67_4 | 5881 | 6675 | + | 3.A.1.17.4 |
| pfam | HRGMv2_2270_67 | HRGMv2_2270_67_5 | 7056 | 7331 | + | DUF6809 |
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_6 | 7454 | 8998 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_7 | 8988 | 10571 | - | GH39 |
| TC | HRGMv2_2270_67 | HRGMv2_2270_67_8 | 10568 | 11398 | - | 3.A.1.1.39 |
| TC | HRGMv2_2270_67 | HRGMv2_2270_67_9 | 11428 | 12330 | - | 3.A.1.1.11 |
| STP | HRGMv2_2270_67 | HRGMv2_2270_67_10 | 12448 | 13812 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_11 | 13955 | 16276 | - | GH2 |
| TF | HRGMv2_2270_67 | HRGMv2_2270_67_12 | 16546 | 16797 | - | HTH_3 |
| TF | HRGMv2_2270_67 | HRGMv2_2270_67_13 | 16910 | 17731 | + | HTH_AraC |
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_14 | 17775 | 18938 | - | GH88 |
| pfam | HRGMv2_2270_67 | HRGMv2_2270_67_15 | 19208 | 20419 | + | AlkZ-like |
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_16 | 20897 | 22024 | - | GH106 |
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_17 | 21993 | 23429 | - | GH28 |
| CAZyme | HRGMv2_2270_67 | HRGMv2_2270_67_18 | 23670 | 24767 | + | CE19 |
Gene ID: HRGMv2_2270_67_1
Type: CAZyme
Location: 2 - 3925 (-)
Type: CAZyme
Location: 2 - 3925 (-)
Gene ID: HRGMv2_2270_67_2
Type:
Location: 3943 - 4722 (-)
Type:
Location: 3943 - 4722 (-)
Gene ID: HRGMv2_2270_67_3
Type: TC
Location: 5121 - 5888 (+)
Type: TC
Location: 5121 - 5888 (+)
Gene ID: HRGMv2_2270_67_4
Type: TC
Location: 5881 - 6675 (+)
Type: TC
Location: 5881 - 6675 (+)
Gene ID: HRGMv2_2270_67_5
Type: pfam
Location: 7056 - 7331 (+)
Type: pfam
Location: 7056 - 7331 (+)
Gene ID: HRGMv2_2270_67_6
Type: CAZyme
Location: 7454 - 8998 (-)
Type: CAZyme
Location: 7454 - 8998 (-)
Gene ID: HRGMv2_2270_67_7
Type: CAZyme
Location: 8988 - 10571 (-)
Type: CAZyme
Location: 8988 - 10571 (-)
Gene ID: HRGMv2_2270_67_8
Type: TC
Location: 10568 - 11398 (-)
Type: TC
Location: 10568 - 11398 (-)
Gene ID: HRGMv2_2270_67_9
Type: TC
Location: 11428 - 12330 (-)
Type: TC
Location: 11428 - 12330 (-)
Gene ID: HRGMv2_2270_67_10
Type: STP
Location: 12448 - 13812 (-)
Type: STP
Location: 12448 - 13812 (-)
Gene ID: HRGMv2_2270_67_11
Type: CAZyme
Location: 13955 - 16276 (-)
Type: CAZyme
Location: 13955 - 16276 (-)
Gene ID: HRGMv2_2270_67_12
Type: TF
Location: 16546 - 16797 (-)
Type: TF
Location: 16546 - 16797 (-)
Gene ID: HRGMv2_2270_67_13
Type: TF
Location: 16910 - 17731 (+)
Type: TF
Location: 16910 - 17731 (+)
Gene ID: HRGMv2_2270_67_14
Type: CAZyme
Location: 17775 - 18938 (-)
Type: CAZyme
Location: 17775 - 18938 (-)
Gene ID: HRGMv2_2270_67_15
Type: pfam
Location: 19208 - 20419 (+)
Type: pfam
Location: 19208 - 20419 (+)
Gene ID: HRGMv2_2270_67_16
Type: CAZyme
Location: 20897 - 22024 (-)
Type: CAZyme
Location: 20897 - 22024 (-)
Gene ID: HRGMv2_2270_67_17
Type: CAZyme
Location: 21993 - 23429 (-)
Type: CAZyme
Location: 21993 - 23429 (-)
Gene ID: HRGMv2_2270_67_18
Type: CAZyme
Location: 23670 - 24767 (+)
Type: CAZyme
Location: 23670 - 24767 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.