Cluster: HRGMv2_2270_CGC116
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2270_65 | HRGMv2_2270_65_9 | 13575 | 14987 | + | 3.B.1.1.1 |
| pfam | HRGMv2_2270_65 | HRGMv2_2270_65_10 | 15084 | 15494 | + | CMD |
| TF | HRGMv2_2270_65 | HRGMv2_2270_65_11 | 15601 | 16476 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2270_65 | HRGMv2_2270_65_12 | 16642 | 18045 | + | GH4 |
Gene ID: HRGMv2_2270_65_9
Type: TC
Location: 13575 - 14987 (+)
Type: TC
Location: 13575 - 14987 (+)
Gene ID: HRGMv2_2270_65_10
Type: pfam
Location: 15084 - 15494 (+)
Type: pfam
Location: 15084 - 15494 (+)
Gene ID: HRGMv2_2270_65_11
Type: TF
Location: 15601 - 16476 (-)
Type: TF
Location: 15601 - 16476 (-)
Gene ID: HRGMv2_2270_65_12
Type: CAZyme
Location: 16642 - 18045 (+)
Type: CAZyme
Location: 16642 - 18045 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.