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Cluster: HRGMv2_2270_CGC111

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_57 HRGMv2_2270_57_12 14467 15765 + 3.A.1.1.46
TC HRGMv2_2270_57 HRGMv2_2270_57_13 15862 16743 + 3.A.1.1.7
TC HRGMv2_2270_57 HRGMv2_2270_57_14 16744 17577 + 3.A.1.1.45
CAZyme HRGMv2_2270_57 HRGMv2_2270_57_15 17649 18590 + GH159
TC HRGMv2_2270_57 HRGMv2_2270_57_16 18801 20078 + 4.A.3.2.6
TF HRGMv2_2270_57 HRGMv2_2270_57_17 20086 22104 + HTH_11 | Mga
CAZyme HRGMv2_2270_57 HRGMv2_2270_57_18 22158 23495 + GH4
TC HRGMv2_2270_57 HRGMv2_2270_57_19 23547 23846 + 4.A.3.2.6
TC HRGMv2_2270_57 HRGMv2_2270_57_20 23861 24184 + 4.A.3.2.8
Gene ID: HRGMv2_2270_57_12
Type: TC
Location: 14467 - 15765 (+)
Gene ID: HRGMv2_2270_57_13
Type: TC
Location: 15862 - 16743 (+)
Gene ID: HRGMv2_2270_57_14
Type: TC
Location: 16744 - 17577 (+)
Gene ID: HRGMv2_2270_57_15
Type: CAZyme
Location: 17649 - 18590 (+)
Gene ID: HRGMv2_2270_57_16
Type: TC
Location: 18801 - 20078 (+)
Gene ID: HRGMv2_2270_57_17
Type: TF
Location: 20086 - 22104 (+)
Gene ID: HRGMv2_2270_57_18
Type: CAZyme
Location: 22158 - 23495 (+)
Gene ID: HRGMv2_2270_57_19
Type: TC
Location: 23547 - 23846 (+)
Gene ID: HRGMv2_2270_57_20
Type: TC
Location: 23861 - 24184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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