Cluster: HRGMv2_2270_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_2 | HRGMv2_2270_2_108 | 142295 | 143905 | + | CBM50 |
| pfam | HRGMv2_2270_2 | HRGMv2_2270_2_109 | 144983 | 145231 | + | GIY-YIG |
| TC | HRGMv2_2270_2 | HRGMv2_2270_2_110 | 145469 | 146116 | - | 1.C.113.1.3 |
| STP | HRGMv2_2270_2 | HRGMv2_2270_2_111 | 146334 | 147068 | + | Nitroreductase |
| pfam | HRGMv2_2270_2 | HRGMv2_2270_2_112 | 147164 | 147907 | + | PseudoU_synth_2 |
| TC | HRGMv2_2270_2 | HRGMv2_2270_2_113 | 148114 | 149739 | + | 2.A.68.1.2 |
Gene ID: HRGMv2_2270_2_108
Type: CAZyme
Location: 142295 - 143905 (+)
Type: CAZyme
Location: 142295 - 143905 (+)
Gene ID: HRGMv2_2270_2_109
Type: pfam
Location: 144983 - 145231 (+)
Type: pfam
Location: 144983 - 145231 (+)
Gene ID: HRGMv2_2270_2_110
Type: TC
Location: 145469 - 146116 (-)
Type: TC
Location: 145469 - 146116 (-)
Gene ID: HRGMv2_2270_2_111
Type: STP
Location: 146334 - 147068 (+)
Type: STP
Location: 146334 - 147068 (+)
Gene ID: HRGMv2_2270_2_112
Type: pfam
Location: 147164 - 147907 (+)
Type: pfam
Location: 147164 - 147907 (+)
Gene ID: HRGMv2_2270_2_113
Type: TC
Location: 148114 - 149739 (+)
Type: TC
Location: 148114 - 149739 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.