Cluster: HRGMv2_2270_CGC108
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_00041
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_53 | HRGMv2_2270_53_9 | 12849 | 13970 | + | GH105 |
| TC | HRGMv2_2270_53 | HRGMv2_2270_53_10 | 13984 | 14898 | + | 3.A.1.1.11 |
| TC | HRGMv2_2270_53 | HRGMv2_2270_53_11 | 14913 | 15761 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_2270_53 | HRGMv2_2270_53_12 | 15766 | 17355 | + | GH28 |
| pfam | HRGMv2_2270_53 | HRGMv2_2270_53_13 | 17352 | 18176 | + | AP_endonuc_2 |
| TC | HRGMv2_2270_53 | HRGMv2_2270_53_14 | 18211 | 19515 | + | 2.A.66.1.37 |
Gene ID: HRGMv2_2270_53_9
Type: CAZyme
Location: 12849 - 13970 (+)
Type: CAZyme
Location: 12849 - 13970 (+)
Gene ID: HRGMv2_2270_53_10
Type: TC
Location: 13984 - 14898 (+)
Type: TC
Location: 13984 - 14898 (+)
Gene ID: HRGMv2_2270_53_11
Type: TC
Location: 14913 - 15761 (+)
Type: TC
Location: 14913 - 15761 (+)
Gene ID: HRGMv2_2270_53_12
Type: CAZyme
Location: 15766 - 17355 (+)
Type: CAZyme
Location: 15766 - 17355 (+)
Gene ID: HRGMv2_2270_53_13
Type: pfam
Location: 17352 - 18176 (+)
Type: pfam
Location: 17352 - 18176 (+)
Gene ID: HRGMv2_2270_53_14
Type: TC
Location: 18211 - 19515 (+)
Type: TC
Location: 18211 - 19515 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.