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Cluster: HRGMv2_2270_CGC104

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_43 HRGMv2_2270_43_30 35492 36625 - 2.A.45.2.6
CAZyme HRGMv2_2270_43 HRGMv2_2270_43_31 36680 38488 - PL33_1
TF HRGMv2_2270_43 HRGMv2_2270_43_32 38485 40113 - HTH_AraC | HTH_AraC
TC HRGMv2_2270_43 HRGMv2_2270_43_33 40110 42011 - 8.A.59.2.1
STP HRGMv2_2270_43 HRGMv2_2270_43_34 42424 43788 + SBP_bac_1
TC HRGMv2_2270_43 HRGMv2_2270_43_35 43915 44982 + 3.A.1.1.34
TC HRGMv2_2270_43 HRGMv2_2270_43_36 45000 45488 + 3.A.1.1.18
Gene ID: HRGMv2_2270_43_30
Type: TC
Location: 35492 - 36625 (-)
Gene ID: HRGMv2_2270_43_31
Type: CAZyme
Location: 36680 - 38488 (-)
Gene ID: HRGMv2_2270_43_32
Type: TF
Location: 38485 - 40113 (-)
Gene ID: HRGMv2_2270_43_33
Type: TC
Location: 40110 - 42011 (-)
Gene ID: HRGMv2_2270_43_34
Type: STP
Location: 42424 - 43788 (+)
Gene ID: HRGMv2_2270_43_35
Type: TC
Location: 43915 - 44982 (+)
Gene ID: HRGMv2_2270_43_36
Type: TC
Location: 45000 - 45488 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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