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Cluster: HRGMv2_2270_CGC102

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2270_42 HRGMv2_2270_42_8 9091 9891 + 3.A.1.17.2
TC HRGMv2_2270_42 HRGMv2_2270_42_9 9908 10663 + 3.A.1.16.1
pfam HRGMv2_2270_42 HRGMv2_2270_42_10 10897 11439 + Acetyltransf_1 | Acetyltransf_7
TF HRGMv2_2270_42 HRGMv2_2270_42_11 11485 12477 + LacI
TC HRGMv2_2270_42 HRGMv2_2270_42_12 12809 14728 + 4.A.1.2.9
CAZyme HRGMv2_2270_42 HRGMv2_2270_42_13 14789 16219 + GH32
pfam HRGMv2_2270_42 HRGMv2_2270_42_14 16271 16627 - DUF6176
CAZyme HRGMv2_2270_42 HRGMv2_2270_42_15 16855 17439 + AA6
pfam HRGMv2_2270_42 HRGMv2_2270_42_16 17631 18473 + KduI
TC HRGMv2_2270_42 HRGMv2_2270_42_17 18762 20069 + 3.A.1.1.28
TC HRGMv2_2270_42 HRGMv2_2270_42_18 20164 21003 + 3.A.1.1.28
TC HRGMv2_2270_42 HRGMv2_2270_42_19 21008 21841 + 3.A.1.1.28
pfam HRGMv2_2270_42 HRGMv2_2270_42_20 21852 22682 + Lactamase_B_2
TC HRGMv2_2270_42 HRGMv2_2270_42_21 22688 24610 + 9.B.33.1.1
Gene ID: HRGMv2_2270_42_8
Type: TC
Location: 9091 - 9891 (+)
Gene ID: HRGMv2_2270_42_9
Type: TC
Location: 9908 - 10663 (+)
Gene ID: HRGMv2_2270_42_10
Type: pfam
Location: 10897 - 11439 (+)
Gene ID: HRGMv2_2270_42_11
Type: TF
Location: 11485 - 12477 (+)
Gene ID: HRGMv2_2270_42_12
Type: TC
Location: 12809 - 14728 (+)
Gene ID: HRGMv2_2270_42_13
Type: CAZyme
Location: 14789 - 16219 (+)
Gene ID: HRGMv2_2270_42_14
Type: pfam
Location: 16271 - 16627 (-)
Gene ID: HRGMv2_2270_42_15
Type: CAZyme
Location: 16855 - 17439 (+)
Gene ID: HRGMv2_2270_42_16
Type: pfam
Location: 17631 - 18473 (+)
Gene ID: HRGMv2_2270_42_17
Type: TC
Location: 18762 - 20069 (+)
Gene ID: HRGMv2_2270_42_18
Type: TC
Location: 20164 - 21003 (+)
Gene ID: HRGMv2_2270_42_19
Type: TC
Location: 21008 - 21841 (+)
Gene ID: HRGMv2_2270_42_20
Type: pfam
Location: 21852 - 22682 (+)
Gene ID: HRGMv2_2270_42_21
Type: TC
Location: 22688 - 24610 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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