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Cluster: HRGMv2_2270_CGC101

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2270_41 HRGMv2_2270_41_19 17132 18391 - GT4
pfam HRGMv2_2270_41 HRGMv2_2270_41_20 18405 18914 - VTT_dom
CAZyme HRGMv2_2270_41 HRGMv2_2270_41_21 19011 24563 - PL8
pfam HRGMv2_2270_41 HRGMv2_2270_41_22 24805 25512 - UPF0029 | DUF1949
CAZyme HRGMv2_2270_41 HRGMv2_2270_41_23 25710 28397 + GT51
pfam HRGMv2_2270_41 HRGMv2_2270_41_24 28486 28839 - SpoVAC_SpoVAEB
TC HRGMv2_2270_41 HRGMv2_2270_41_25 28869 29882 - 9.A.11.1.1
TC HRGMv2_2270_41 HRGMv2_2270_41_26 30186 30638 - 9.A.11.1.1
pfam HRGMv2_2270_41 HRGMv2_2270_41_27 30662 31087 - SpoVAB
TC HRGMv2_2270_41 HRGMv2_2270_41_28 31077 31703 - 9.A.11.1.1
Gene ID: HRGMv2_2270_41_19
Type: CAZyme
Location: 17132 - 18391 (-)
Gene ID: HRGMv2_2270_41_20
Type: pfam
Location: 18405 - 18914 (-)
Gene ID: HRGMv2_2270_41_21
Type: CAZyme
Location: 19011 - 24563 (-)
Gene ID: HRGMv2_2270_41_22
Type: pfam
Location: 24805 - 25512 (-)
Gene ID: HRGMv2_2270_41_23
Type: CAZyme
Location: 25710 - 28397 (+)
Gene ID: HRGMv2_2270_41_24
Type: pfam
Location: 28486 - 28839 (-)
Gene ID: HRGMv2_2270_41_25
Type: TC
Location: 28869 - 29882 (-)
Gene ID: HRGMv2_2270_41_26
Type: TC
Location: 30186 - 30638 (-)
Gene ID: HRGMv2_2270_41_27
Type: pfam
Location: 30662 - 31087 (-)
Gene ID: HRGMv2_2270_41_28
Type: TC
Location: 31077 - 31703 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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