Cluster: HRGMv2_2270_CGC100
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2270
- CGC Family ID: CGCFAM_10011
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2270_40 | HRGMv2_2270_40_48 | 47553 | 49805 | + | GH31_3 |
| pfam | HRGMv2_2270_40 | HRGMv2_2270_40_49 | 49894 | 50919 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3 |
| TC | HRGMv2_2270_40 | HRGMv2_2270_40_50 | 51391 | 52482 | + | 3.A.1.20.1 |
Gene ID: HRGMv2_2270_40_48
Type: CAZyme
Location: 47553 - 49805 (+)
Type: CAZyme
Location: 47553 - 49805 (+)
Gene ID: HRGMv2_2270_40_49
Type: pfam
Location: 49894 - 50919 (+)
Type: pfam
Location: 49894 - 50919 (+)
Gene ID: HRGMv2_2270_40_50
Type: TC
Location: 51391 - 52482 (+)
Type: TC
Location: 51391 - 52482 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella
Species
Hungatella effluvii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.