Cluster: HRGMv2_2268_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2268
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2268_32 | HRGMv2_2268_32_6 | 2398 | 3702 | + | GT2 |
| TC | HRGMv2_2268_32 | HRGMv2_2268_32_7 | 3739 | 6276 | - | 3.A.3.5.15 |
| pfam | HRGMv2_2268_32 | HRGMv2_2268_32_8 | 6300 | 6608 | - | Trns_repr_metal |
| TC | HRGMv2_2268_32 | HRGMv2_2268_32_9 | 6776 | 8506 | + | 1.B.52.2.1 |
Gene ID: HRGMv2_2268_32_6
Type: CAZyme
Location: 2398 - 3702 (+)
Type: CAZyme
Location: 2398 - 3702 (+)
Gene ID: HRGMv2_2268_32_7
Type: TC
Location: 3739 - 6276 (-)
Type: TC
Location: 3739 - 6276 (-)
Gene ID: HRGMv2_2268_32_8
Type: pfam
Location: 6300 - 6608 (-)
Type: pfam
Location: 6300 - 6608 (-)
Gene ID: HRGMv2_2268_32_9
Type: TC
Location: 6776 - 8506 (+)
Type: TC
Location: 6776 - 8506 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp000437755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.