Cluster: HRGMv2_2268_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2268
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2268_21 | HRGMv2_2268_21_16 | 12970 | 13446 | - | 3.A.2.2.2 |
| TC | HRGMv2_2268_21 | HRGMv2_2268_21_17 | 13450 | 15462 | - | 3.A.2.2.2 |
| NULL(UNKNOWN) | HRGMv2_2268_21 | HRGMv2_2268_21_18 | 15493 | 15801 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2268_21 | HRGMv2_2268_21_19 | 15998 | 18220 | - | EAL | GGDEF | dCache_1 |
| CAZyme | HRGMv2_2268_21 | HRGMv2_2268_21_20 | 18705 | 20846 | - | GH13_39 |
| TC | HRGMv2_2268_21 | HRGMv2_2268_21_21 | 21113 | 22954 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_2268_21_16
Type: TC
Location: 12970 - 13446 (-)
Type: TC
Location: 12970 - 13446 (-)
Gene ID: HRGMv2_2268_21_17
Type: TC
Location: 13450 - 15462 (-)
Type: TC
Location: 13450 - 15462 (-)
Gene ID: HRGMv2_2268_21_18
Type:
Location: 15493 - 15801 (-)
Type:
Location: 15493 - 15801 (-)
Gene ID: HRGMv2_2268_21_19
Type: STP
Location: 15998 - 18220 (-)
Type: STP
Location: 15998 - 18220 (-)
Gene ID: HRGMv2_2268_21_20
Type: CAZyme
Location: 18705 - 20846 (-)
Type: CAZyme
Location: 18705 - 20846 (-)
Gene ID: HRGMv2_2268_21_21
Type: TC
Location: 21113 - 22954 (-)
Type: TC
Location: 21113 - 22954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp000437755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.