Cluster: HRGMv2_2268_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2268
- CGC Family ID: CGCFAM_00457
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2268_14 | HRGMv2_2268_14_8 | 9247 | 10143 | - | 1.A.35.3.2 |
| TC | HRGMv2_2268_14 | HRGMv2_2268_14_9 | 10183 | 10824 | - | 1.B.52.2.1 |
| STP | HRGMv2_2268_14 | HRGMv2_2268_14_10 | 10850 | 12199 | - | AAA |
| NULL(UNKNOWN) | HRGMv2_2268_14 | HRGMv2_2268_14_11 | 12218 | 12631 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2268_14 | HRGMv2_2268_14_12 | 12741 | 15188 | - | 3.A.9.1.2 |
| pfam | HRGMv2_2268_14 | HRGMv2_2268_14_13 | 15225 | 16841 | - | Cohesin | Cadherin-like |
| CAZyme | HRGMv2_2268_14 | HRGMv2_2268_14_14 | 16860 | 18752 | - | GH73 |
Gene ID: HRGMv2_2268_14_8
Type: TC
Location: 9247 - 10143 (-)
Type: TC
Location: 9247 - 10143 (-)
Gene ID: HRGMv2_2268_14_9
Type: TC
Location: 10183 - 10824 (-)
Type: TC
Location: 10183 - 10824 (-)
Gene ID: HRGMv2_2268_14_10
Type: STP
Location: 10850 - 12199 (-)
Type: STP
Location: 10850 - 12199 (-)
Gene ID: HRGMv2_2268_14_11
Type:
Location: 12218 - 12631 (-)
Type:
Location: 12218 - 12631 (-)
Gene ID: HRGMv2_2268_14_12
Type: TC
Location: 12741 - 15188 (-)
Type: TC
Location: 12741 - 15188 (-)
Gene ID: HRGMv2_2268_14_13
Type: pfam
Location: 15225 - 16841 (-)
Type: pfam
Location: 15225 - 16841 (-)
Gene ID: HRGMv2_2268_14_14
Type: CAZyme
Location: 16860 - 18752 (-)
Type: CAZyme
Location: 16860 - 18752 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp000437755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.