Cluster: HRGMv2_2268_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2268
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2268_111 | HRGMv2_2268_111_2 | 1644 | 3719 | - | 3.A.3.32.3 |
| pfam | HRGMv2_2268_111 | HRGMv2_2268_111_3 | 3808 | 4134 | - | DUF6110 |
| TC | HRGMv2_2268_111 | HRGMv2_2268_111_4 | 4241 | 5950 | - | 1.B.52.2.1 |
| TC | HRGMv2_2268_111 | HRGMv2_2268_111_5 | 6021 | 6635 | - | 2.A.115.2.14 |
| TC | HRGMv2_2268_111 | HRGMv2_2268_111_6 | 6712 | 7887 | - | 2.A.36.2.1 |
| pfam | HRGMv2_2268_111 | HRGMv2_2268_111_7 | 8311 | 9786 | + | Viral_helicase1 | SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C |
| CAZyme | HRGMv2_2268_111 | HRGMv2_2268_111_8 | 9933 | 13670 | + | GH51_2 |
Gene ID: HRGMv2_2268_111_2
Type: TC
Location: 1644 - 3719 (-)
Type: TC
Location: 1644 - 3719 (-)
Gene ID: HRGMv2_2268_111_3
Type: pfam
Location: 3808 - 4134 (-)
Type: pfam
Location: 3808 - 4134 (-)
Gene ID: HRGMv2_2268_111_4
Type: TC
Location: 4241 - 5950 (-)
Type: TC
Location: 4241 - 5950 (-)
Gene ID: HRGMv2_2268_111_5
Type: TC
Location: 6021 - 6635 (-)
Type: TC
Location: 6021 - 6635 (-)
Gene ID: HRGMv2_2268_111_6
Type: TC
Location: 6712 - 7887 (-)
Type: TC
Location: 6712 - 7887 (-)
Gene ID: HRGMv2_2268_111_7
Type: pfam
Location: 8311 - 9786 (+)
Type: pfam
Location: 8311 - 9786 (+)
Gene ID: HRGMv2_2268_111_8
Type: CAZyme
Location: 9933 - 13670 (+)
Type: CAZyme
Location: 9933 - 13670 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp000437755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.