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Cluster: HRGMv2_2268_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2268_88 HRGMv2_2268_88_18 18298 21486 - GH43_4
pfam HRGMv2_2268_88 HRGMv2_2268_88_19 21718 23223 + SSF
TC HRGMv2_2268_88 HRGMv2_2268_88_20 23271 25304 - 3.A.10.1.5
TC HRGMv2_2268_88 HRGMv2_2268_88_21 25567 26745 + 2.A.4.7.4
TF HRGMv2_2268_88 HRGMv2_2268_88_22 26752 27963 - 0037176
peptidase HRGMv2_2268_88 HRGMv2_2268_88_23 28007 29260 - M38.UNW
TC HRGMv2_2268_88 HRGMv2_2268_88_24 29278 30045 - 3.A.1.11.6
TC HRGMv2_2268_88 HRGMv2_2268_88_25 30059 30889 - 3.A.1.11.3
TC HRGMv2_2268_88 HRGMv2_2268_88_26 30921 31970 - 3.A.1.11.6
TC HRGMv2_2268_88 HRGMv2_2268_88_27 31984 33078 - 3.A.1.11.6
pfam HRGMv2_2268_88 HRGMv2_2268_88_28 33306 34052 + Creatininase
TC HRGMv2_2268_88 HRGMv2_2268_88_29 34070 34678 + 2.A.115.2.14
Gene ID: HRGMv2_2268_88_18
Type: CAZyme
Location: 18298 - 21486 (-)
Gene ID: HRGMv2_2268_88_19
Type: pfam
Location: 21718 - 23223 (+)
Gene ID: HRGMv2_2268_88_20
Type: TC
Location: 23271 - 25304 (-)
Gene ID: HRGMv2_2268_88_21
Type: TC
Location: 25567 - 26745 (+)
Gene ID: HRGMv2_2268_88_22
Type: TF
Location: 26752 - 27963 (-)
Gene ID: HRGMv2_2268_88_23
Type: peptidase
Location: 28007 - 29260 (-)
Gene ID: HRGMv2_2268_88_24
Type: TC
Location: 29278 - 30045 (-)
Gene ID: HRGMv2_2268_88_25
Type: TC
Location: 30059 - 30889 (-)
Gene ID: HRGMv2_2268_88_26
Type: TC
Location: 30921 - 31970 (-)
Gene ID: HRGMv2_2268_88_27
Type: TC
Location: 31984 - 33078 (-)
Gene ID: HRGMv2_2268_88_28
Type: pfam
Location: 33306 - 34052 (+)
Gene ID: HRGMv2_2268_88_29
Type: TC
Location: 34070 - 34678 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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