dbCAN Logo

Cluster: HRGMv2_2268_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2268_77 HRGMv2_2268_77_36 38510 40300 - 2.A.58.2.2
pfam HRGMv2_2268_77 HRGMv2_2268_77_37 40448 40942 - Hpre_diP_synt_I
TC HRGMv2_2268_77 HRGMv2_2268_77_38 40959 42731 - 3.A.1.106.3
TC HRGMv2_2268_77 HRGMv2_2268_77_39 42724 44559 - 3.A.1.106.3
STP HRGMv2_2268_77 HRGMv2_2268_77_40 44654 45799 - Ada_Zn_binding
pfam HRGMv2_2268_77 HRGMv2_2268_77_41 45802 48381 - GTP_EFTU | EFG_C | EFG_IV | NYN_YacP | EFG_III
TC HRGMv2_2268_77 HRGMv2_2268_77_42 48402 49070 - 8.A.59.4.1
pfam HRGMv2_2268_77 HRGMv2_2268_77_43 49207 49554 - YgbA_NO
TC HRGMv2_2268_77 HRGMv2_2268_77_44 49554 49874 - 3.A.1.17.2
CAZyme HRGMv2_2268_77 HRGMv2_2268_77_45 49965 52100 - GH13_11
TC HRGMv2_2268_77 HRGMv2_2268_77_46 52275 54116 - 1.B.52.2.2
Gene ID: HRGMv2_2268_77_36
Type: TC
Location: 38510 - 40300 (-)
Gene ID: HRGMv2_2268_77_37
Type: pfam
Location: 40448 - 40942 (-)
Gene ID: HRGMv2_2268_77_38
Type: TC
Location: 40959 - 42731 (-)
Gene ID: HRGMv2_2268_77_39
Type: TC
Location: 42724 - 44559 (-)
Gene ID: HRGMv2_2268_77_40
Type: STP
Location: 44654 - 45799 (-)
Gene ID: HRGMv2_2268_77_41
Type: pfam
Location: 45802 - 48381 (-)
Gene ID: HRGMv2_2268_77_42
Type: TC
Location: 48402 - 49070 (-)
Gene ID: HRGMv2_2268_77_43
Type: pfam
Location: 49207 - 49554 (-)
Gene ID: HRGMv2_2268_77_44
Type: TC
Location: 49554 - 49874 (-)
Gene ID: HRGMv2_2268_77_45
Type: CAZyme
Location: 49965 - 52100 (-)
Gene ID: HRGMv2_2268_77_46
Type: TC
Location: 52275 - 54116 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List