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Cluster: HRGMv2_2268_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2268_63 HRGMv2_2268_63_6 2237 6121 - CBM35 | GH97
TF HRGMv2_2268_63 HRGMv2_2268_63_7 6230 7090 - HTH_AraC | HTH_AraC
TC HRGMv2_2268_63 HRGMv2_2268_63_8 7112 8098 - 1.A.23.2.1
CAZyme HRGMv2_2268_63 HRGMv2_2268_63_9 8098 10359 - CBM48 | GH13_9
TC HRGMv2_2268_63 HRGMv2_2268_63_10 10415 11239 - 3.A.1.15.15
TC HRGMv2_2268_63 HRGMv2_2268_63_11 11241 11930 - 3.A.1.15.8
TC HRGMv2_2268_63 HRGMv2_2268_63_12 11931 12884 - 3.A.1.15.3
TC HRGMv2_2268_63 HRGMv2_2268_63_13 13021 14241 - 2.A.81.2.2
Gene ID: HRGMv2_2268_63_6
Type: CAZyme
Location: 2237 - 6121 (-)
Gene ID: HRGMv2_2268_63_7
Type: TF
Location: 6230 - 7090 (-)
Gene ID: HRGMv2_2268_63_8
Type: TC
Location: 7112 - 8098 (-)
Gene ID: HRGMv2_2268_63_9
Type: CAZyme
Location: 8098 - 10359 (-)
Gene ID: HRGMv2_2268_63_10
Type: TC
Location: 10415 - 11239 (-)
Gene ID: HRGMv2_2268_63_11
Type: TC
Location: 11241 - 11930 (-)
Gene ID: HRGMv2_2268_63_12
Type: TC
Location: 11931 - 12884 (-)
Gene ID: HRGMv2_2268_63_13
Type: TC
Location: 13021 - 14241 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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