Cluster: HRGMv2_2268_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2268
- CGC Family ID: CGCFAM_00849
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2268_48 | HRGMv2_2268_48_8 | 3619 | 4497 | - | CE4 |
| TF | HRGMv2_2268_48 | HRGMv2_2268_48_9 | 4653 | 5033 | + | GntR |
| TC | HRGMv2_2268_48 | HRGMv2_2268_48_10 | 5052 | 5981 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | HRGMv2_2268_48 | HRGMv2_2268_48_11 | 5956 | 8103 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2268_48 | HRGMv2_2268_48_12 | 8179 | 10875 | - | 3.A.1.122.13 |
Gene ID: HRGMv2_2268_48_8
Type: CAZyme
Location: 3619 - 4497 (-)
Type: CAZyme
Location: 3619 - 4497 (-)
Gene ID: HRGMv2_2268_48_9
Type: TF
Location: 4653 - 5033 (+)
Type: TF
Location: 4653 - 5033 (+)
Gene ID: HRGMv2_2268_48_10
Type: TC
Location: 5052 - 5981 (+)
Type: TC
Location: 5052 - 5981 (+)
Gene ID: HRGMv2_2268_48_11
Type:
Location: 5956 - 8103 (+)
Type:
Location: 5956 - 8103 (+)
Gene ID: HRGMv2_2268_48_12
Type: TC
Location: 8179 - 10875 (-)
Type: TC
Location: 8179 - 10875 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp000437755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.