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Cluster: HRGMv2_2268_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2268_44 HRGMv2_2268_44_6 7965 9425 + GT4
pfam HRGMv2_2268_44 HRGMv2_2268_44_7 9447 10913 + PelG
NULL(UNKNOWN) HRGMv2_2268_44 HRGMv2_2268_44_8 10915 11295 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2268_44 HRGMv2_2268_44_9 11292 12500 + GT4
CAZyme HRGMv2_2268_44 HRGMv2_2268_44_10 12522 13295 + GT2
pfam HRGMv2_2268_44 HRGMv2_2268_44_11 13282 14550 + DUF4832 | DUF4874
pfam HRGMv2_2268_44 HRGMv2_2268_44_12 14547 15971 - DUF4832 | DUF4874
TC HRGMv2_2268_44 HRGMv2_2268_44_13 16277 17815 + 2.A.66.1.40
pfam HRGMv2_2268_44 HRGMv2_2268_44_14 17802 19001 + NTP_transf_5
CAZyme HRGMv2_2268_44 HRGMv2_2268_44_15 18998 20080 + GT4
NULL(UNKNOWN) HRGMv2_2268_44 HRGMv2_2268_44_16 20160 20417 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2268_44 HRGMv2_2268_44_17 20460 20873 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2268_44 HRGMv2_2268_44_18 21050 22861 + 3.A.1.111.2
TC HRGMv2_2268_44 HRGMv2_2268_44_19 22836 24605 + 3.A.1.111.2
TC HRGMv2_2268_44 HRGMv2_2268_44_20 24657 26432 - 3.A.1.112.9
Gene ID: HRGMv2_2268_44_6
Type: CAZyme
Location: 7965 - 9425 (+)
Gene ID: HRGMv2_2268_44_7
Type: pfam
Location: 9447 - 10913 (+)
Gene ID: HRGMv2_2268_44_8
Type:
Location: 10915 - 11295 (+)
Gene ID: HRGMv2_2268_44_9
Type: CAZyme
Location: 11292 - 12500 (+)
Gene ID: HRGMv2_2268_44_10
Type: CAZyme
Location: 12522 - 13295 (+)
Gene ID: HRGMv2_2268_44_11
Type: pfam
Location: 13282 - 14550 (+)
Gene ID: HRGMv2_2268_44_12
Type: pfam
Location: 14547 - 15971 (-)
Gene ID: HRGMv2_2268_44_13
Type: TC
Location: 16277 - 17815 (+)
Gene ID: HRGMv2_2268_44_14
Type: pfam
Location: 17802 - 19001 (+)
Gene ID: HRGMv2_2268_44_15
Type: CAZyme
Location: 18998 - 20080 (+)
Gene ID: HRGMv2_2268_44_16
Type:
Location: 20160 - 20417 (+)
Gene ID: HRGMv2_2268_44_17
Type:
Location: 20460 - 20873 (+)
Gene ID: HRGMv2_2268_44_18
Type: TC
Location: 21050 - 22861 (+)
Gene ID: HRGMv2_2268_44_19
Type: TC
Location: 22836 - 24605 (+)
Gene ID: HRGMv2_2268_44_20
Type: TC
Location: 24657 - 26432 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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