Cluster: HRGMv2_2268_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2268
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2268_5 | HRGMv2_2268_5_3 | 5290 | 7254 | - | GH51_2 |
| pfam | HRGMv2_2268_5 | HRGMv2_2268_5_4 | 7270 | 8028 | - | Exo_endo_phos |
| TC | HRGMv2_2268_5 | HRGMv2_2268_5_5 | 8100 | 10109 | - | 3.A.16.1.2 |
| STP | HRGMv2_2268_5 | HRGMv2_2268_5_6 | 10343 | 11953 | + | CbiA |
| TC | HRGMv2_2268_5 | HRGMv2_2268_5_7 | 12034 | 13902 | - | 3.A.3.6.10 |
Gene ID: HRGMv2_2268_5_3
Type: CAZyme
Location: 5290 - 7254 (-)
Type: CAZyme
Location: 5290 - 7254 (-)
Gene ID: HRGMv2_2268_5_4
Type: pfam
Location: 7270 - 8028 (-)
Type: pfam
Location: 7270 - 8028 (-)
Gene ID: HRGMv2_2268_5_5
Type: TC
Location: 8100 - 10109 (-)
Type: TC
Location: 8100 - 10109 (-)
Gene ID: HRGMv2_2268_5_6
Type: STP
Location: 10343 - 11953 (+)
Type: STP
Location: 10343 - 11953 (+)
Gene ID: HRGMv2_2268_5_7
Type: TC
Location: 12034 - 13902 (-)
Type: TC
Location: 12034 - 13902 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-303
Species
CAG-303 sp000437755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.