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Cluster: HRGMv2_2263_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2263_1 HRGMv2_2263_1_177 214537 216831 - GH31_3
TC HRGMv2_2263_1 HRGMv2_2263_1_178 217002 218840 + 8.A.59.2.1
NULL(UNKNOWN) HRGMv2_2263_1 HRGMv2_2263_1_179 218975 220798 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2263_1 HRGMv2_2263_1_180 221640 223091 + 3.A.1.1.29
TC HRGMv2_2263_1 HRGMv2_2263_1_181 223103 224065 + 3.A.1.1.29
pfam HRGMv2_2263_1 HRGMv2_2263_1_182 224193 225899 + SBP_bac_1 | SBP_bac_8
TC HRGMv2_2263_1 HRGMv2_2263_1_183 226051 226671 + 9.B.28.1.2
CAZyme HRGMv2_2263_1 HRGMv2_2263_1_184 226671 229472 + GH5_4
Gene ID: HRGMv2_2263_1_177
Type: CAZyme
Location: 214537 - 216831 (-)
Gene ID: HRGMv2_2263_1_178
Type: TC
Location: 217002 - 218840 (+)
Gene ID: HRGMv2_2263_1_179
Type:
Location: 218975 - 220798 (+)
Gene ID: HRGMv2_2263_1_180
Type: TC
Location: 221640 - 223091 (+)
Gene ID: HRGMv2_2263_1_181
Type: TC
Location: 223103 - 224065 (+)
Gene ID: HRGMv2_2263_1_182
Type: pfam
Location: 224193 - 225899 (+)
Gene ID: HRGMv2_2263_1_183
Type: TC
Location: 226051 - 226671 (+)
Gene ID: HRGMv2_2263_1_184
Type: CAZyme
Location: 226671 - 229472 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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