Cluster: HRGMv2_2263_CGC52
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2263
- CGC Family ID: CGCFAM_02671
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2263_28 | HRGMv2_2263_28_7 | 8739 | 11552 | - | GH2 |
| TF | HRGMv2_2263_28 | HRGMv2_2263_28_8 | 11583 | 12965 | - | GntR |
| CAZyme | HRGMv2_2263_28 | HRGMv2_2263_28_9 | 12994 | 14250 | - | GH27 |
| pfam | HRGMv2_2263_28 | HRGMv2_2263_28_10 | 14343 | 14972 | + | PRK |
| pfam | HRGMv2_2263_28 | HRGMv2_2263_28_11 | 14981 | 15469 | - | LuxS |
| TC | HRGMv2_2263_28 | HRGMv2_2263_28_12 | 15625 | 16416 | + | 2.A.79.1.5 |
Gene ID: HRGMv2_2263_28_7
Type: CAZyme
Location: 8739 - 11552 (-)
Type: CAZyme
Location: 8739 - 11552 (-)
Gene ID: HRGMv2_2263_28_8
Type: TF
Location: 11583 - 12965 (-)
Type: TF
Location: 11583 - 12965 (-)
Gene ID: HRGMv2_2263_28_9
Type: CAZyme
Location: 12994 - 14250 (-)
Type: CAZyme
Location: 12994 - 14250 (-)
Gene ID: HRGMv2_2263_28_10
Type: pfam
Location: 14343 - 14972 (+)
Type: pfam
Location: 14343 - 14972 (+)
Gene ID: HRGMv2_2263_28_11
Type: pfam
Location: 14981 - 15469 (-)
Type: pfam
Location: 14981 - 15469 (-)
Gene ID: HRGMv2_2263_28_12
Type: TC
Location: 15625 - 16416 (+)
Type: TC
Location: 15625 - 16416 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.