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Cluster: HRGMv2_2263_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2263_27 HRGMv2_2263_27_10 9490 12027 + GT51
pfam HRGMv2_2263_27 HRGMv2_2263_27_11 12210 12566 - SpoVAC_SpoVAEB
TC HRGMv2_2263_27 HRGMv2_2263_27_12 12594 13628 - 9.A.11.1.1
TC HRGMv2_2263_27 HRGMv2_2263_27_13 13766 14665 - 2.A.115.1.1
TC HRGMv2_2263_27 HRGMv2_2263_27_14 14719 15663 - 2.A.19.5.2
STP HRGMv2_2263_27 HRGMv2_2263_27_15 15770 16258 - HD
TC HRGMv2_2263_27 HRGMv2_2263_27_16 16361 16843 - 9.A.11.1.1
pfam HRGMv2_2263_27 HRGMv2_2263_27_17 16923 17354 - SpoVAB
TC HRGMv2_2263_27 HRGMv2_2263_27_18 17344 17970 - 9.A.11.1.1
Gene ID: HRGMv2_2263_27_10
Type: CAZyme
Location: 9490 - 12027 (+)
Gene ID: HRGMv2_2263_27_11
Type: pfam
Location: 12210 - 12566 (-)
Gene ID: HRGMv2_2263_27_12
Type: TC
Location: 12594 - 13628 (-)
Gene ID: HRGMv2_2263_27_13
Type: TC
Location: 13766 - 14665 (-)
Gene ID: HRGMv2_2263_27_14
Type: TC
Location: 14719 - 15663 (-)
Gene ID: HRGMv2_2263_27_15
Type: STP
Location: 15770 - 16258 (-)
Gene ID: HRGMv2_2263_27_16
Type: TC
Location: 16361 - 16843 (-)
Gene ID: HRGMv2_2263_27_17
Type: pfam
Location: 16923 - 17354 (-)
Gene ID: HRGMv2_2263_27_18
Type: TC
Location: 17344 - 17970 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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