Cluster: HRGMv2_2263_CGC50
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2263
- CGC Family ID: CGCFAM_03090
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_26 | HRGMv2_2263_26_24 | 30199 | 32031 | + | 3.A.16.1.1 |
| CAZyme | HRGMv2_2263_26 | HRGMv2_2263_26_25 | 32571 | 34691 | + | GH13_39 |
| pfam | HRGMv2_2263_26 | HRGMv2_2263_26_26 | 34694 | 35731 | + | Acyl_transf_3 |
| TC | HRGMv2_2263_26 | HRGMv2_2263_26_27 | 35748 | 37238 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_2263_26 | HRGMv2_2263_26_28 | 37407 | 38303 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2263_26 | HRGMv2_2263_26_29 | 38389 | 40695 | + | GH36 |
Gene ID: HRGMv2_2263_26_24
Type: TC
Location: 30199 - 32031 (+)
Type: TC
Location: 30199 - 32031 (+)
Gene ID: HRGMv2_2263_26_25
Type: CAZyme
Location: 32571 - 34691 (+)
Type: CAZyme
Location: 32571 - 34691 (+)
Gene ID: HRGMv2_2263_26_26
Type: pfam
Location: 34694 - 35731 (+)
Type: pfam
Location: 34694 - 35731 (+)
Gene ID: HRGMv2_2263_26_27
Type: TC
Location: 35748 - 37238 (+)
Type: TC
Location: 35748 - 37238 (+)
Gene ID: HRGMv2_2263_26_28
Type:
Location: 37407 - 38303 (+)
Type:
Location: 37407 - 38303 (+)
Gene ID: HRGMv2_2263_26_29
Type: CAZyme
Location: 38389 - 40695 (+)
Type: CAZyme
Location: 38389 - 40695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.