Cluster: HRGMv2_2263_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2263_1 | HRGMv2_2263_1_105 | 131790 | 133808 | + | GH31_1 |
| CAZyme | HRGMv2_2263_1 | HRGMv2_2263_1_106 | 133839 | 137318 | + | GH2 |
| TF | HRGMv2_2263_1 | HRGMv2_2263_1_107 | 137723 | 138082 | + | HTH_5 |
| STP | HRGMv2_2263_1 | HRGMv2_2263_1_108 | 138115 | 138333 | + | HMA |
| TC | HRGMv2_2263_1 | HRGMv2_2263_1_109 | 138396 | 140267 | + | 3.A.3.6.10 |
Gene ID: HRGMv2_2263_1_105
Type: CAZyme
Location: 131790 - 133808 (+)
Type: CAZyme
Location: 131790 - 133808 (+)
Gene ID: HRGMv2_2263_1_106
Type: CAZyme
Location: 133839 - 137318 (+)
Type: CAZyme
Location: 133839 - 137318 (+)
Gene ID: HRGMv2_2263_1_107
Type: TF
Location: 137723 - 138082 (+)
Type: TF
Location: 137723 - 138082 (+)
Gene ID: HRGMv2_2263_1_108
Type: STP
Location: 138115 - 138333 (+)
Type: STP
Location: 138115 - 138333 (+)
Gene ID: HRGMv2_2263_1_109
Type: TC
Location: 138396 - 140267 (+)
Type: TC
Location: 138396 - 140267 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.