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Cluster: HRGMv2_2263_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_26 HRGMv2_2263_26_2 473 2233 + 3.A.1.135.5
TC HRGMv2_2263_26 HRGMv2_2263_26_3 2233 4140 + 3.A.1.135.5
peptidase HRGMv2_2263_26 HRGMv2_2263_26_4 4354 6147 + M24.UPB
TC HRGMv2_2263_26 HRGMv2_2263_26_5 6453 8066 + 3.A.1.106.15
CAZyme HRGMv2_2263_26 HRGMv2_2263_26_6 8122 14544 + PL11_1
TC HRGMv2_2263_26 HRGMv2_2263_26_7 14615 16309 - 8.A.59.4.1
TF HRGMv2_2263_26 HRGMv2_2263_26_8 16532 18373 + HTH_3
TC HRGMv2_2263_26 HRGMv2_2263_26_9 18540 19058 + 3.A.1.106.15
NULL(UNKNOWN) HRGMv2_2263_26 HRGMv2_2263_26_10 19051 19458 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2263_26 HRGMv2_2263_26_11 19455 20678 + 3.A.1.210.2
STP HRGMv2_2263_26 HRGMv2_2263_26_12 20864 22150 + SBP_bac_1
TC HRGMv2_2263_26 HRGMv2_2263_26_13 22168 23904 + 1.B.52.2.2
Gene ID: HRGMv2_2263_26_2
Type: TC
Location: 473 - 2233 (+)
Gene ID: HRGMv2_2263_26_3
Type: TC
Location: 2233 - 4140 (+)
Gene ID: HRGMv2_2263_26_4
Type: peptidase
Location: 4354 - 6147 (+)
Gene ID: HRGMv2_2263_26_5
Type: TC
Location: 6453 - 8066 (+)
Gene ID: HRGMv2_2263_26_6
Type: CAZyme
Location: 8122 - 14544 (+)
Gene ID: HRGMv2_2263_26_7
Type: TC
Location: 14615 - 16309 (-)
Gene ID: HRGMv2_2263_26_8
Type: TF
Location: 16532 - 18373 (+)
Gene ID: HRGMv2_2263_26_9
Type: TC
Location: 18540 - 19058 (+)
Gene ID: HRGMv2_2263_26_10
Type:
Location: 19051 - 19458 (+)
Gene ID: HRGMv2_2263_26_11
Type: TC
Location: 19455 - 20678 (+)
Gene ID: HRGMv2_2263_26_12
Type: STP
Location: 20864 - 22150 (+)
Gene ID: HRGMv2_2263_26_13
Type: TC
Location: 22168 - 23904 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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