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Cluster: HRGMv2_2263_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_25 HRGMv2_2263_25_27 30447 31295 - 3.A.1.149.1
TF HRGMv2_2263_25 HRGMv2_2263_25_28 31326 31697 - GntR
TF HRGMv2_2263_25 HRGMv2_2263_25_29 31850 32206 - Pencillinase_R
CAZyme HRGMv2_2263_25 HRGMv2_2263_25_30 32616 34766 - CBM61 | GH53
TC HRGMv2_2263_25 HRGMv2_2263_25_31 34892 36031 - 3.A.1.20.2
TC HRGMv2_2263_25 HRGMv2_2263_25_32 36121 37854 - 3.A.1.20.2
TC HRGMv2_2263_25 HRGMv2_2263_25_33 37860 38990 - 3.A.1.11.1
TF HRGMv2_2263_25 HRGMv2_2263_25_34 39278 40015 + GntR
pfam HRGMv2_2263_25 HRGMv2_2263_25_35 40042 40380 + P-II
TC HRGMv2_2263_25 HRGMv2_2263_25_36 40412 41101 + 9.B.20.1.4
Gene ID: HRGMv2_2263_25_27
Type: TC
Location: 30447 - 31295 (-)
Gene ID: HRGMv2_2263_25_28
Type: TF
Location: 31326 - 31697 (-)
Gene ID: HRGMv2_2263_25_29
Type: TF
Location: 31850 - 32206 (-)
Gene ID: HRGMv2_2263_25_30
Type: CAZyme
Location: 32616 - 34766 (-)
Gene ID: HRGMv2_2263_25_31
Type: TC
Location: 34892 - 36031 (-)
Gene ID: HRGMv2_2263_25_32
Type: TC
Location: 36121 - 37854 (-)
Gene ID: HRGMv2_2263_25_33
Type: TC
Location: 37860 - 38990 (-)
Gene ID: HRGMv2_2263_25_34
Type: TF
Location: 39278 - 40015 (+)
Gene ID: HRGMv2_2263_25_35
Type: pfam
Location: 40042 - 40380 (+)
Gene ID: HRGMv2_2263_25_36
Type: TC
Location: 40412 - 41101 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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