Cluster: HRGMv2_2263_CGC46
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_24 | HRGMv2_2263_24_34 | 37979 | 38938 | + | 3.A.1.1.10 |
| TC | HRGMv2_2263_24 | HRGMv2_2263_24_35 | 38956 | 39882 | + | 3.A.1.1.10 |
| STP | HRGMv2_2263_24 | HRGMv2_2263_24_36 | 39945 | 41480 | + | SBP_bac_1 |
| CAZyme | HRGMv2_2263_24 | HRGMv2_2263_24_37 | 41547 | 43994 | + | PL11 |
Gene ID: HRGMv2_2263_24_34
Type: TC
Location: 37979 - 38938 (+)
Type: TC
Location: 37979 - 38938 (+)
Gene ID: HRGMv2_2263_24_35
Type: TC
Location: 38956 - 39882 (+)
Type: TC
Location: 38956 - 39882 (+)
Gene ID: HRGMv2_2263_24_36
Type: STP
Location: 39945 - 41480 (+)
Type: STP
Location: 39945 - 41480 (+)
Gene ID: HRGMv2_2263_24_37
Type: CAZyme
Location: 41547 - 43994 (+)
Type: CAZyme
Location: 41547 - 43994 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.