dbCAN Logo

Cluster: HRGMv2_2263_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2263_22 HRGMv2_2263_22_3 2474 4309 - PL33_1
TF HRGMv2_2263_22 HRGMv2_2263_22_4 4351 5958 - HTH_AraC | HTH_AraC
TC HRGMv2_2263_22 HRGMv2_2263_22_5 5943 7778 - 8.A.59.2.1
STP HRGMv2_2263_22 HRGMv2_2263_22_6 8052 9428 + SBP_bac_1
TC HRGMv2_2263_22 HRGMv2_2263_22_7 9513 10565 + 3.A.1.1.23
TC HRGMv2_2263_22 HRGMv2_2263_22_8 10581 11429 + 3.A.1.1.11
CAZyme HRGMv2_2263_22 HRGMv2_2263_22_9 11660 12865 + GH88
Gene ID: HRGMv2_2263_22_3
Type: CAZyme
Location: 2474 - 4309 (-)
Gene ID: HRGMv2_2263_22_4
Type: TF
Location: 4351 - 5958 (-)
Gene ID: HRGMv2_2263_22_5
Type: TC
Location: 5943 - 7778 (-)
Gene ID: HRGMv2_2263_22_6
Type: STP
Location: 8052 - 9428 (+)
Gene ID: HRGMv2_2263_22_7
Type: TC
Location: 9513 - 10565 (+)
Gene ID: HRGMv2_2263_22_8
Type: TC
Location: 10581 - 11429 (+)
Gene ID: HRGMv2_2263_22_9
Type: CAZyme
Location: 11660 - 12865 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List