Cluster: HRGMv2_2263_CGC43
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2263_21 | HRGMv2_2263_21_18 | 25118 | 28438 | + | CBM67 | GH78 |
| pfam | HRGMv2_2263_21 | HRGMv2_2263_21_19 | 28510 | 29403 | - | VCA0040-like | VCA0040-like |
| TC | HRGMv2_2263_21 | HRGMv2_2263_21_20 | 29840 | 30796 | + | 9.B.70.1.1 |
Gene ID: HRGMv2_2263_21_18
Type: CAZyme
Location: 25118 - 28438 (+)
Type: CAZyme
Location: 25118 - 28438 (+)
Gene ID: HRGMv2_2263_21_19
Type: pfam
Location: 28510 - 29403 (-)
Type: pfam
Location: 28510 - 29403 (-)
Gene ID: HRGMv2_2263_21_20
Type: TC
Location: 29840 - 30796 (+)
Type: TC
Location: 29840 - 30796 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.