Cluster: HRGMv2_2263_CGC41
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_19 | HRGMv2_2263_19_56 | 55974 | 57380 | - | 3.B.1.1.6 |
| TC | HRGMv2_2263_19 | HRGMv2_2263_19_57 | 57659 | 58816 | - | 3.B.1.1.2 |
| TC | HRGMv2_2263_19 | HRGMv2_2263_19_58 | 58844 | 59209 | - | 3.B.1.1.2 |
| pfam | HRGMv2_2263_19 | HRGMv2_2263_19_59 | 59225 | 59575 | - | OAD_gamma |
| TC | HRGMv2_2263_19 | HRGMv2_2263_19_60 | 59591 | 61021 | - | 3.B.1.1.5 |
| peptidase | HRGMv2_2263_19 | HRGMv2_2263_19_61 | 61206 | 62450 | - | S11.UPW |
| TC | HRGMv2_2263_19 | HRGMv2_2263_19_62 | 62639 | 63277 | - | 1.A.16.5.1 |
| CAZyme | HRGMv2_2263_19 | HRGMv2_2263_19_63 | 63412 | 65157 | - | GH35 |
Gene ID: HRGMv2_2263_19_56
Type: TC
Location: 55974 - 57380 (-)
Type: TC
Location: 55974 - 57380 (-)
Gene ID: HRGMv2_2263_19_57
Type: TC
Location: 57659 - 58816 (-)
Type: TC
Location: 57659 - 58816 (-)
Gene ID: HRGMv2_2263_19_58
Type: TC
Location: 58844 - 59209 (-)
Type: TC
Location: 58844 - 59209 (-)
Gene ID: HRGMv2_2263_19_59
Type: pfam
Location: 59225 - 59575 (-)
Type: pfam
Location: 59225 - 59575 (-)
Gene ID: HRGMv2_2263_19_60
Type: TC
Location: 59591 - 61021 (-)
Type: TC
Location: 59591 - 61021 (-)
Gene ID: HRGMv2_2263_19_61
Type: peptidase
Location: 61206 - 62450 (-)
Type: peptidase
Location: 61206 - 62450 (-)
Gene ID: HRGMv2_2263_19_62
Type: TC
Location: 62639 - 63277 (-)
Type: TC
Location: 62639 - 63277 (-)
Gene ID: HRGMv2_2263_19_63
Type: CAZyme
Location: 63412 - 65157 (-)
Type: CAZyme
Location: 63412 - 65157 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.