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Cluster: HRGMv2_2263_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_19 HRGMv2_2263_19_56 55974 57380 - 3.B.1.1.6
TC HRGMv2_2263_19 HRGMv2_2263_19_57 57659 58816 - 3.B.1.1.2
TC HRGMv2_2263_19 HRGMv2_2263_19_58 58844 59209 - 3.B.1.1.2
pfam HRGMv2_2263_19 HRGMv2_2263_19_59 59225 59575 - OAD_gamma
TC HRGMv2_2263_19 HRGMv2_2263_19_60 59591 61021 - 3.B.1.1.5
peptidase HRGMv2_2263_19 HRGMv2_2263_19_61 61206 62450 - S11.UPW
TC HRGMv2_2263_19 HRGMv2_2263_19_62 62639 63277 - 1.A.16.5.1
CAZyme HRGMv2_2263_19 HRGMv2_2263_19_63 63412 65157 - GH35
Gene ID: HRGMv2_2263_19_56
Type: TC
Location: 55974 - 57380 (-)
Gene ID: HRGMv2_2263_19_57
Type: TC
Location: 57659 - 58816 (-)
Gene ID: HRGMv2_2263_19_58
Type: TC
Location: 58844 - 59209 (-)
Gene ID: HRGMv2_2263_19_59
Type: pfam
Location: 59225 - 59575 (-)
Gene ID: HRGMv2_2263_19_60
Type: TC
Location: 59591 - 61021 (-)
Gene ID: HRGMv2_2263_19_61
Type: peptidase
Location: 61206 - 62450 (-)
Gene ID: HRGMv2_2263_19_62
Type: TC
Location: 62639 - 63277 (-)
Gene ID: HRGMv2_2263_19_63
Type: CAZyme
Location: 63412 - 65157 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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