Cluster: HRGMv2_2263_CGC38
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2263
- CGC Family ID: CGCFAM_03545
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_17 | HRGMv2_2263_17_6 | 7537 | 9609 | - | 1.B.52.2.1 |
| TC | HRGMv2_2263_17 | HRGMv2_2263_17_7 | 10203 | 10889 | + | 1.C.113.1.3 |
| TF | HRGMv2_2263_17 | HRGMv2_2263_17_8 | 10862 | 11689 | - | HTH_AraC |
| CAZyme | HRGMv2_2263_17 | HRGMv2_2263_17_9 | 12224 | 14668 | + | GH2 |
| CAZyme | HRGMv2_2263_17 | HRGMv2_2263_17_10 | 14808 | 18323 | + | GH115 |
| TC | HRGMv2_2263_17 | HRGMv2_2263_17_11 | 18325 | 19692 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_2263_17_6
Type: TC
Location: 7537 - 9609 (-)
Type: TC
Location: 7537 - 9609 (-)
Gene ID: HRGMv2_2263_17_7
Type: TC
Location: 10203 - 10889 (+)
Type: TC
Location: 10203 - 10889 (+)
Gene ID: HRGMv2_2263_17_8
Type: TF
Location: 10862 - 11689 (-)
Type: TF
Location: 10862 - 11689 (-)
Gene ID: HRGMv2_2263_17_9
Type: CAZyme
Location: 12224 - 14668 (+)
Type: CAZyme
Location: 12224 - 14668 (+)
Gene ID: HRGMv2_2263_17_10
Type: CAZyme
Location: 14808 - 18323 (+)
Type: CAZyme
Location: 14808 - 18323 (+)
Gene ID: HRGMv2_2263_17_11
Type: TC
Location: 18325 - 19692 (+)
Type: TC
Location: 18325 - 19692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.