Cluster: HRGMv2_2263_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2263_16 | HRGMv2_2263_16_45 | 47857 | 48960 | + | GT4 |
| CAZyme | HRGMv2_2263_16 | HRGMv2_2263_16_46 | 48964 | 50043 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2263_16 | HRGMv2_2263_16_47 | 50051 | 51373 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2263_16 | HRGMv2_2263_16_48 | 51374 | 52492 | + | GT4 |
| pfam | HRGMv2_2263_16 | HRGMv2_2263_16_49 | 52514 | 53383 | + | Glycos_transf_2 |
| TC | HRGMv2_2263_16 | HRGMv2_2263_16_50 | 53463 | 54854 | + | 9.B.18.1.2 |
Gene ID: HRGMv2_2263_16_45
Type: CAZyme
Location: 47857 - 48960 (+)
Type: CAZyme
Location: 47857 - 48960 (+)
Gene ID: HRGMv2_2263_16_46
Type: CAZyme
Location: 48964 - 50043 (+)
Type: CAZyme
Location: 48964 - 50043 (+)
Gene ID: HRGMv2_2263_16_47
Type:
Location: 50051 - 51373 (+)
Type:
Location: 50051 - 51373 (+)
Gene ID: HRGMv2_2263_16_48
Type: CAZyme
Location: 51374 - 52492 (+)
Type: CAZyme
Location: 51374 - 52492 (+)
Gene ID: HRGMv2_2263_16_49
Type: pfam
Location: 52514 - 53383 (+)
Type: pfam
Location: 52514 - 53383 (+)
Gene ID: HRGMv2_2263_16_50
Type: TC
Location: 53463 - 54854 (+)
Type: TC
Location: 53463 - 54854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.