Cluster: HRGMv2_2263_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2263_16 | HRGMv2_2263_16_35 | 37025 | 37792 | + | GT26 |
| NULL(UNKNOWN) | HRGMv2_2263_16 | HRGMv2_2263_16_36 | 37821 | 39002 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2263_16 | HRGMv2_2263_16_37 | 38995 | 40110 | + | GT4 |
| CAZyme | HRGMv2_2263_16 | HRGMv2_2263_16_38 | 40112 | 40951 | + | GT11 |
| TC | HRGMv2_2263_16 | HRGMv2_2263_16_39 | 40948 | 42690 | + | 3.A.1.106.15 |
| CAZyme | HRGMv2_2263_16 | HRGMv2_2263_16_40 | 42674 | 43645 | + | GT2 |
Gene ID: HRGMv2_2263_16_35
Type: CAZyme
Location: 37025 - 37792 (+)
Type: CAZyme
Location: 37025 - 37792 (+)
Gene ID: HRGMv2_2263_16_36
Type:
Location: 37821 - 39002 (+)
Type:
Location: 37821 - 39002 (+)
Gene ID: HRGMv2_2263_16_37
Type: CAZyme
Location: 38995 - 40110 (+)
Type: CAZyme
Location: 38995 - 40110 (+)
Gene ID: HRGMv2_2263_16_38
Type: CAZyme
Location: 40112 - 40951 (+)
Type: CAZyme
Location: 40112 - 40951 (+)
Gene ID: HRGMv2_2263_16_39
Type: TC
Location: 40948 - 42690 (+)
Type: TC
Location: 40948 - 42690 (+)
Gene ID: HRGMv2_2263_16_40
Type: CAZyme
Location: 42674 - 43645 (+)
Type: CAZyme
Location: 42674 - 43645 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.