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Cluster: HRGMv2_2263_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2263_13 HRGMv2_2263_13_59 62818 64659 - PL27
TF HRGMv2_2263_13 HRGMv2_2263_13_60 64776 65555 + HTH_AraC
pfam HRGMv2_2263_13 HRGMv2_2263_13_61 65548 66474 - SUFBD_core
TC HRGMv2_2263_13 HRGMv2_2263_13_62 66474 67283 - 3.A.1.4.3
pfam HRGMv2_2263_13 HRGMv2_2263_13_63 67900 69015 - Meth_synt_2
TF HRGMv2_2263_13 HRGMv2_2263_13_64 69738 70634 - HTH_1
CAZyme HRGMv2_2263_13 HRGMv2_2263_13_65 70697 72004 - GH32
CAZyme HRGMv2_2263_13 HRGMv2_2263_13_66 72200 73159 + GH159
Gene ID: HRGMv2_2263_13_59
Type: CAZyme
Location: 62818 - 64659 (-)
Gene ID: HRGMv2_2263_13_60
Type: TF
Location: 64776 - 65555 (+)
Gene ID: HRGMv2_2263_13_61
Type: pfam
Location: 65548 - 66474 (-)
Gene ID: HRGMv2_2263_13_62
Type: TC
Location: 66474 - 67283 (-)
Gene ID: HRGMv2_2263_13_63
Type: pfam
Location: 67900 - 69015 (-)
Gene ID: HRGMv2_2263_13_64
Type: TF
Location: 69738 - 70634 (-)
Gene ID: HRGMv2_2263_13_65
Type: CAZyme
Location: 70697 - 72004 (-)
Gene ID: HRGMv2_2263_13_66
Type: CAZyme
Location: 72200 - 73159 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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