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Cluster: HRGMv2_2263_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_13 HRGMv2_2263_13_18 15227 15931 - 3.A.1.122.14
CAZyme HRGMv2_2263_13 HRGMv2_2263_13_19 16153 17088 + GH43_22
TC HRGMv2_2263_13 HRGMv2_2263_13_20 17097 17675 - 2.A.51.1.6
TC HRGMv2_2263_13 HRGMv2_2263_13_21 17672 18274 - 2.A.51.1.6
STP HRGMv2_2263_13 HRGMv2_2263_13_22 18545 20224 - EAL | GGDEF
TC HRGMv2_2263_13 HRGMv2_2263_13_23 20268 22040 - 1.B.52.2.2
NULL(UNKNOWN) HRGMv2_2263_13 HRGMv2_2263_13_24 22285 23109 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2263_13 HRGMv2_2263_13_25 23323 25398 - 3.A.3.32.3
Gene ID: HRGMv2_2263_13_18
Type: TC
Location: 15227 - 15931 (-)
Gene ID: HRGMv2_2263_13_19
Type: CAZyme
Location: 16153 - 17088 (+)
Gene ID: HRGMv2_2263_13_20
Type: TC
Location: 17097 - 17675 (-)
Gene ID: HRGMv2_2263_13_21
Type: TC
Location: 17672 - 18274 (-)
Gene ID: HRGMv2_2263_13_22
Type: STP
Location: 18545 - 20224 (-)
Gene ID: HRGMv2_2263_13_23
Type: TC
Location: 20268 - 22040 (-)
Gene ID: HRGMv2_2263_13_24
Type:
Location: 22285 - 23109 (-)
Gene ID: HRGMv2_2263_13_25
Type: TC
Location: 23323 - 25398 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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