Cluster: HRGMv2_2263_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_1 | HRGMv2_2263_1_87 | 109148 | 110137 | + | 8.A.5.1.6 |
| pfam | HRGMv2_2263_1 | HRGMv2_2263_1_88 | 110197 | 110805 | + | FTCD_C |
| pfam | HRGMv2_2263_1 | HRGMv2_2263_1_89 | 110835 | 111674 | + | THF_DHG_CYH | THF_DHG_CYH_C |
| CAZyme | HRGMv2_2263_1 | HRGMv2_2263_1_90 | 111715 | 113829 | + | GH154 |
| pfam | HRGMv2_2263_1 | HRGMv2_2263_1_91 | 114381 | 114752 | - | Ribonuc_L-PSP |
| CAZyme | HRGMv2_2263_1 | HRGMv2_2263_1_92 | 114847 | 115806 | - | GH26 |
Gene ID: HRGMv2_2263_1_87
Type: TC
Location: 109148 - 110137 (+)
Type: TC
Location: 109148 - 110137 (+)
Gene ID: HRGMv2_2263_1_88
Type: pfam
Location: 110197 - 110805 (+)
Type: pfam
Location: 110197 - 110805 (+)
Gene ID: HRGMv2_2263_1_89
Type: pfam
Location: 110835 - 111674 (+)
Type: pfam
Location: 110835 - 111674 (+)
Gene ID: HRGMv2_2263_1_90
Type: CAZyme
Location: 111715 - 113829 (+)
Type: CAZyme
Location: 111715 - 113829 (+)
Gene ID: HRGMv2_2263_1_91
Type: pfam
Location: 114381 - 114752 (-)
Type: pfam
Location: 114381 - 114752 (-)
Gene ID: HRGMv2_2263_1_92
Type: CAZyme
Location: 114847 - 115806 (-)
Type: CAZyme
Location: 114847 - 115806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.