Cluster: HRGMv2_2263_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_10 | HRGMv2_2263_10_49 | 53794 | 54756 | + | 3.A.1.1.20 |
| pfam | HRGMv2_2263_10 | HRGMv2_2263_10_50 | 54786 | 56663 | + | CBM65_1 | CBM65_1 | CBM65_1 |
| STP | HRGMv2_2263_10 | HRGMv2_2263_10_51 | 56683 | 58155 | + | SBP_bac_1 |
| TC | HRGMv2_2263_10 | HRGMv2_2263_10_52 | 58260 | 58904 | + | 9.B.28.1.8 |
| TF | HRGMv2_2263_10 | HRGMv2_2263_10_53 | 58920 | 59942 | + | LacI |
| CAZyme | HRGMv2_2263_10 | HRGMv2_2263_10_54 | 59952 | 60974 | + | GH130_2 |
| CAZyme | HRGMv2_2263_10 | HRGMv2_2263_10_55 | 61004 | 62014 | + | GH5_4 |
Gene ID: HRGMv2_2263_10_49
Type: TC
Location: 53794 - 54756 (+)
Type: TC
Location: 53794 - 54756 (+)
Gene ID: HRGMv2_2263_10_50
Type: pfam
Location: 54786 - 56663 (+)
Type: pfam
Location: 54786 - 56663 (+)
Gene ID: HRGMv2_2263_10_51
Type: STP
Location: 56683 - 58155 (+)
Type: STP
Location: 56683 - 58155 (+)
Gene ID: HRGMv2_2263_10_52
Type: TC
Location: 58260 - 58904 (+)
Type: TC
Location: 58260 - 58904 (+)
Gene ID: HRGMv2_2263_10_53
Type: TF
Location: 58920 - 59942 (+)
Type: TF
Location: 58920 - 59942 (+)
Gene ID: HRGMv2_2263_10_54
Type: CAZyme
Location: 59952 - 60974 (+)
Type: CAZyme
Location: 59952 - 60974 (+)
Gene ID: HRGMv2_2263_10_55
Type: CAZyme
Location: 61004 - 62014 (+)
Type: CAZyme
Location: 61004 - 62014 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.