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Cluster: HRGMv2_2263_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_4 HRGMv2_2263_4_100 117255 119042 + 3.A.1.210.9
TC HRGMv2_2263_4 HRGMv2_2263_4_101 119020 120708 + 3.A.1.135.9
TC HRGMv2_2263_4 HRGMv2_2263_4_102 120799 122889 + 1.B.52.2.1
pfam HRGMv2_2263_4 HRGMv2_2263_4_103 122939 123385 - dUTPase | DCD
pfam HRGMv2_2263_4 HRGMv2_2263_4_104 123798 124319 - Radical_SAM | Fer4_12
CAZyme HRGMv2_2263_4 HRGMv2_2263_4_105 124339 125298 - CE8
CAZyme HRGMv2_2263_4 HRGMv2_2263_4_106 125398 128028 + GH28
TC HRGMv2_2263_4 HRGMv2_2263_4_107 128047 129942 + 3.A.1.121.4
Gene ID: HRGMv2_2263_4_100
Type: TC
Location: 117255 - 119042 (+)
Gene ID: HRGMv2_2263_4_101
Type: TC
Location: 119020 - 120708 (+)
Gene ID: HRGMv2_2263_4_102
Type: TC
Location: 120799 - 122889 (+)
Gene ID: HRGMv2_2263_4_103
Type: pfam
Location: 122939 - 123385 (-)
Gene ID: HRGMv2_2263_4_104
Type: pfam
Location: 123798 - 124319 (-)
Gene ID: HRGMv2_2263_4_105
Type: CAZyme
Location: 124339 - 125298 (-)
Gene ID: HRGMv2_2263_4_106
Type: CAZyme
Location: 125398 - 128028 (+)
Gene ID: HRGMv2_2263_4_107
Type: TC
Location: 128047 - 129942 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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