Cluster: HRGMv2_2263_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2263
- CGC Family ID: CGCFAM_05102
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_4 | HRGMv2_2263_4_40 | 45651 | 46376 | + | 3.A.1.16.1 |
| pfam | HRGMv2_2263_4 | HRGMv2_2263_4_41 | 46377 | 47207 | + | BPD_transp_1 |
| pfam | HRGMv2_2263_4 | HRGMv2_2263_4_42 | 47271 | 48263 | - | DHH | DHHA1 |
| CAZyme | HRGMv2_2263_4 | HRGMv2_2263_4_43 | 48481 | 50076 | + | CE4 |
Gene ID: HRGMv2_2263_4_40
Type: TC
Location: 45651 - 46376 (+)
Type: TC
Location: 45651 - 46376 (+)
Gene ID: HRGMv2_2263_4_41
Type: pfam
Location: 46377 - 47207 (+)
Type: pfam
Location: 46377 - 47207 (+)
Gene ID: HRGMv2_2263_4_42
Type: pfam
Location: 47271 - 48263 (-)
Type: pfam
Location: 47271 - 48263 (-)
Gene ID: HRGMv2_2263_4_43
Type: CAZyme
Location: 48481 - 50076 (+)
Type: CAZyme
Location: 48481 - 50076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.