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Cluster: HRGMv2_2263_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_3 HRGMv2_2263_3_58 60923 61153 + 3.D.1.6.4
pfam HRGMv2_2263_3 HRGMv2_2263_3_59 61174 61944 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
pfam HRGMv2_2263_3 HRGMv2_2263_3_60 61960 65535 + SMC_N | SMC_hinge | AAA_15 | AAA_21 | AAA_23
TC HRGMv2_2263_3 HRGMv2_2263_3_61 65541 66467 + 3.A.5.1.1
STP HRGMv2_2263_3 HRGMv2_2263_3_62 66558 67781 + ACT | PALP
TC HRGMv2_2263_3 HRGMv2_2263_3_63 67799 69139 + 2.A.38.4.1
TC HRGMv2_2263_3 HRGMv2_2263_3_64 69158 69811 + 2.A.38.4.6
CAZyme HRGMv2_2263_3 HRGMv2_2263_3_65 69822 71480 + CBM91 | GH43_10
pfam HRGMv2_2263_3 HRGMv2_2263_3_66 71580 73064 + Fucose_iso_C
pfam HRGMv2_2263_3 HRGMv2_2263_3_67 73177 74637 + FGGY_N | FGGY_C
TC HRGMv2_2263_3 HRGMv2_2263_3_68 74663 76660 + 3.A.1.121.4
pfam HRGMv2_2263_3 HRGMv2_2263_3_69 76660 77628 + Dus
TC HRGMv2_2263_3 HRGMv2_2263_3_70 77790 79127 + 2.A.40.7.6
Gene ID: HRGMv2_2263_3_58
Type: TC
Location: 60923 - 61153 (+)
Gene ID: HRGMv2_2263_3_59
Type: pfam
Location: 61174 - 61944 (+)
Gene ID: HRGMv2_2263_3_60
Type: pfam
Location: 61960 - 65535 (+)
Gene ID: HRGMv2_2263_3_61
Type: TC
Location: 65541 - 66467 (+)
Gene ID: HRGMv2_2263_3_62
Type: STP
Location: 66558 - 67781 (+)
Gene ID: HRGMv2_2263_3_63
Type: TC
Location: 67799 - 69139 (+)
Gene ID: HRGMv2_2263_3_64
Type: TC
Location: 69158 - 69811 (+)
Gene ID: HRGMv2_2263_3_65
Type: CAZyme
Location: 69822 - 71480 (+)
Gene ID: HRGMv2_2263_3_66
Type: pfam
Location: 71580 - 73064 (+)
Gene ID: HRGMv2_2263_3_67
Type: pfam
Location: 73177 - 74637 (+)
Gene ID: HRGMv2_2263_3_68
Type: TC
Location: 74663 - 76660 (+)
Gene ID: HRGMv2_2263_3_69
Type: pfam
Location: 76660 - 77628 (+)
Gene ID: HRGMv2_2263_3_70
Type: TC
Location: 77790 - 79127 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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