Cluster: HRGMv2_2263_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_2263
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_157 | 192382 | 193488 | - | GT4 |
| TC | HRGMv2_2263_2 | HRGMv2_2263_2_158 | 193511 | 194878 | - | 3.A.1.103.1 |
| TC | HRGMv2_2263_2 | HRGMv2_2263_2_159 | 194868 | 195656 | - | 3.A.1.103.5 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_160 | 195664 | 196539 | - | GT2 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_161 | 196536 | 198077 | - | GT4 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_162 | 198082 | 198939 | - | GT2 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_163 | 198944 | 200077 | - | GT4 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_164 | 200098 | 200844 | - | GT2 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_165 | 200855 | 201832 | - | GT2 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_166 | 201856 | 202881 | - | GT2 |
| pfam | HRGMv2_2263_2 | HRGMv2_2263_2_167 | 202930 | 204771 | - | PBS_linker_poly | DUF4214 | DUF4214 | DUF4214 | DUF4214 |
| pfam | HRGMv2_2263_2 | HRGMv2_2263_2_168 | 204824 | 205990 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_2263_2 | HRGMv2_2263_2_169 | 206044 | 207300 | - | 2.A.86.1.8 |
Gene ID: HRGMv2_2263_2_157
Type: CAZyme
Location: 192382 - 193488 (-)
Type: CAZyme
Location: 192382 - 193488 (-)
Gene ID: HRGMv2_2263_2_158
Type: TC
Location: 193511 - 194878 (-)
Type: TC
Location: 193511 - 194878 (-)
Gene ID: HRGMv2_2263_2_159
Type: TC
Location: 194868 - 195656 (-)
Type: TC
Location: 194868 - 195656 (-)
Gene ID: HRGMv2_2263_2_160
Type: CAZyme
Location: 195664 - 196539 (-)
Type: CAZyme
Location: 195664 - 196539 (-)
Gene ID: HRGMv2_2263_2_161
Type: CAZyme
Location: 196536 - 198077 (-)
Type: CAZyme
Location: 196536 - 198077 (-)
Gene ID: HRGMv2_2263_2_162
Type: CAZyme
Location: 198082 - 198939 (-)
Type: CAZyme
Location: 198082 - 198939 (-)
Gene ID: HRGMv2_2263_2_163
Type: CAZyme
Location: 198944 - 200077 (-)
Type: CAZyme
Location: 198944 - 200077 (-)
Gene ID: HRGMv2_2263_2_164
Type: CAZyme
Location: 200098 - 200844 (-)
Type: CAZyme
Location: 200098 - 200844 (-)
Gene ID: HRGMv2_2263_2_165
Type: CAZyme
Location: 200855 - 201832 (-)
Type: CAZyme
Location: 200855 - 201832 (-)
Gene ID: HRGMv2_2263_2_166
Type: CAZyme
Location: 201856 - 202881 (-)
Type: CAZyme
Location: 201856 - 202881 (-)
Gene ID: HRGMv2_2263_2_167
Type: pfam
Location: 202930 - 204771 (-)
Type: pfam
Location: 202930 - 204771 (-)
Gene ID: HRGMv2_2263_2_168
Type: pfam
Location: 204824 - 205990 (-)
Type: pfam
Location: 204824 - 205990 (-)
Gene ID: HRGMv2_2263_2_169
Type: TC
Location: 206044 - 207300 (-)
Type: TC
Location: 206044 - 207300 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.