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Cluster: HRGMv2_2263_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_2 HRGMv2_2263_2_145 175753 178713 - 1.C.39.4.6
pfam HRGMv2_2263_2 HRGMv2_2263_2_146 178731 179690 - Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
pfam HRGMv2_2263_2 HRGMv2_2263_2_147 179730 180758 - Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme HRGMv2_2263_2 HRGMv2_2263_2_148 180824 181810 - GT2
pfam HRGMv2_2263_2 HRGMv2_2263_2_149 181893 183284 - Hexose_dehydrat | Hexose_dehydrat
CAZyme HRGMv2_2263_2 HRGMv2_2263_2_150 183320 184327 - GT8
TC HRGMv2_2263_2 HRGMv2_2263_2_151 184315 185268 - 9.B.102.7.10
NULL(UNKNOWN) HRGMv2_2263_2 HRGMv2_2263_2_152 185280 187277 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2263_2 HRGMv2_2263_2_153 187296 188414 - GT4
Gene ID: HRGMv2_2263_2_145
Type: TC
Location: 175753 - 178713 (-)
Gene ID: HRGMv2_2263_2_146
Type: pfam
Location: 178731 - 179690 (-)
Gene ID: HRGMv2_2263_2_147
Type: pfam
Location: 179730 - 180758 (-)
Gene ID: HRGMv2_2263_2_148
Type: CAZyme
Location: 180824 - 181810 (-)
Gene ID: HRGMv2_2263_2_149
Type: pfam
Location: 181893 - 183284 (-)
Gene ID: HRGMv2_2263_2_150
Type: CAZyme
Location: 183320 - 184327 (-)
Gene ID: HRGMv2_2263_2_151
Type: TC
Location: 184315 - 185268 (-)
Gene ID: HRGMv2_2263_2_152
Type:
Location: 185280 - 187277 (-)
Gene ID: HRGMv2_2263_2_153
Type: CAZyme
Location: 187296 - 188414 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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