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Cluster: HRGMv2_2263_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_2 HRGMv2_2263_2_79 92149 93561 - 3.A.2.1.5
TC HRGMv2_2263_2 HRGMv2_2263_2_80 93566 94480 - 3.A.2.1.5
TC HRGMv2_2263_2 HRGMv2_2263_2_81 94484 96511 - 3.A.2.1.5
pfam HRGMv2_2263_2 HRGMv2_2263_2_82 96508 96993 - ATP-synt_B
pfam HRGMv2_2263_2 HRGMv2_2263_2_83 97032 97250 - ATP-synt_C
TC HRGMv2_2263_2 HRGMv2_2263_2_84 97312 98004 - 3.A.2.1.5
TC HRGMv2_2263_2 HRGMv2_2263_2_85 98394 100544 + 9.B.74.1.1
pfam HRGMv2_2263_2 HRGMv2_2263_2_86 100800 101465 + EOS1
TC HRGMv2_2263_2 HRGMv2_2263_2_87 101458 103605 + 9.B.74.1.1
CAZyme HRGMv2_2263_2 HRGMv2_2263_2_88 103699 104826 + GH105
Gene ID: HRGMv2_2263_2_79
Type: TC
Location: 92149 - 93561 (-)
Gene ID: HRGMv2_2263_2_80
Type: TC
Location: 93566 - 94480 (-)
Gene ID: HRGMv2_2263_2_81
Type: TC
Location: 94484 - 96511 (-)
Gene ID: HRGMv2_2263_2_82
Type: pfam
Location: 96508 - 96993 (-)
Gene ID: HRGMv2_2263_2_83
Type: pfam
Location: 97032 - 97250 (-)
Gene ID: HRGMv2_2263_2_84
Type: TC
Location: 97312 - 98004 (-)
Gene ID: HRGMv2_2263_2_85
Type: TC
Location: 98394 - 100544 (+)
Gene ID: HRGMv2_2263_2_86
Type: pfam
Location: 100800 - 101465 (+)
Gene ID: HRGMv2_2263_2_87
Type: TC
Location: 101458 - 103605 (+)
Gene ID: HRGMv2_2263_2_88
Type: CAZyme
Location: 103699 - 104826 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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