Cluster: HRGMv2_2263_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2263
- CGC Family ID: CGCFAM_07735
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_2 | 1017 | 2210 | - | GT2 |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_3 | 2239 | 3063 | - | GT8 |
| NULL(UNKNOWN) | HRGMv2_2263_2 | HRGMv2_2263_2_4 | 3548 | 4312 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2263_2 | HRGMv2_2263_2_5 | 4658 | 5305 | + | CxxCxxCC |
| CAZyme | HRGMv2_2263_2 | HRGMv2_2263_2_6 | 5335 | 7692 | - | GH36 |
| TC | HRGMv2_2263_2 | HRGMv2_2263_2_7 | 8053 | 9459 | - | 2.A.2.1.1 |
Gene ID: HRGMv2_2263_2_2
Type: CAZyme
Location: 1017 - 2210 (-)
Type: CAZyme
Location: 1017 - 2210 (-)
Gene ID: HRGMv2_2263_2_3
Type: CAZyme
Location: 2239 - 3063 (-)
Type: CAZyme
Location: 2239 - 3063 (-)
Gene ID: HRGMv2_2263_2_4
Type:
Location: 3548 - 4312 (-)
Type:
Location: 3548 - 4312 (-)
Gene ID: HRGMv2_2263_2_5
Type: pfam
Location: 4658 - 5305 (+)
Type: pfam
Location: 4658 - 5305 (+)
Gene ID: HRGMv2_2263_2_6
Type: CAZyme
Location: 5335 - 7692 (-)
Type: CAZyme
Location: 5335 - 7692 (-)
Gene ID: HRGMv2_2263_2_7
Type: TC
Location: 8053 - 9459 (-)
Type: TC
Location: 8053 - 9459 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.