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Cluster: HRGMv2_2263_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2263_1 HRGMv2_2263_1_191 234578 236236 + 3.A.1.121.4
STP HRGMv2_2263_1 HRGMv2_2263_1_192 236483 236992 + HD
TC HRGMv2_2263_1 HRGMv2_2263_1_193 237011 238501 - 2.A.2.3.6
TC HRGMv2_2263_1 HRGMv2_2263_1_194 238632 240449 + 3.A.1.120.6
CAZyme HRGMv2_2263_1 HRGMv2_2263_1_195 240475 242358 + GH13_11
NULL(UNKNOWN) HRGMv2_2263_1 HRGMv2_2263_1_196 242338 243126 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2263_1 HRGMv2_2263_1_197 243396 244292 + Zn_dep_PLPC
TC HRGMv2_2263_1 HRGMv2_2263_1_198 244289 244858 + 2.A.1.24.4
Gene ID: HRGMv2_2263_1_191
Type: TC
Location: 234578 - 236236 (+)
Gene ID: HRGMv2_2263_1_192
Type: STP
Location: 236483 - 236992 (+)
Gene ID: HRGMv2_2263_1_193
Type: TC
Location: 237011 - 238501 (-)
Gene ID: HRGMv2_2263_1_194
Type: TC
Location: 238632 - 240449 (+)
Gene ID: HRGMv2_2263_1_195
Type: CAZyme
Location: 240475 - 242358 (+)
Gene ID: HRGMv2_2263_1_196
Type:
Location: 242338 - 243126 (-)
Gene ID: HRGMv2_2263_1_197
Type: pfam
Location: 243396 - 244292 (+)
Gene ID: HRGMv2_2263_1_198
Type: TC
Location: 244289 - 244858 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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