Cluster: HRGMv2_2263_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2263
- CGC Family ID: CGCFAM_10006
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2263_1 | HRGMv2_2263_1_24 | 26489 | 28360 | + | 9.B.34.1.2 |
| STP | HRGMv2_2263_1 | HRGMv2_2263_1_25 | 28407 | 29777 | + | EAL | GGDEF |
| TF | HRGMv2_2263_1 | HRGMv2_2263_1_26 | 29799 | 30218 | + | Rrf2 |
| CAZyme | HRGMv2_2263_1 | HRGMv2_2263_1_27 | 30230 | 32548 | + | GH95 |
| STP | HRGMv2_2263_1 | HRGMv2_2263_1_28 | 32753 | 33250 | + | NUDIX |
| NULL(UNKNOWN) | HRGMv2_2263_1 | HRGMv2_2263_1_29 | 33325 | 34245 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2263_1 | HRGMv2_2263_1_30 | 34404 | 36839 | - | GH94 |
Gene ID: HRGMv2_2263_1_24
Type: TC
Location: 26489 - 28360 (+)
Type: TC
Location: 26489 - 28360 (+)
Gene ID: HRGMv2_2263_1_25
Type: STP
Location: 28407 - 29777 (+)
Type: STP
Location: 28407 - 29777 (+)
Gene ID: HRGMv2_2263_1_26
Type: TF
Location: 29799 - 30218 (+)
Type: TF
Location: 29799 - 30218 (+)
Gene ID: HRGMv2_2263_1_27
Type: CAZyme
Location: 30230 - 32548 (+)
Type: CAZyme
Location: 30230 - 32548 (+)
Gene ID: HRGMv2_2263_1_28
Type: STP
Location: 32753 - 33250 (+)
Type: STP
Location: 32753 - 33250 (+)
Gene ID: HRGMv2_2263_1_29
Type:
Location: 33325 - 34245 (-)
Type:
Location: 33325 - 34245 (-)
Gene ID: HRGMv2_2263_1_30
Type: CAZyme
Location: 34404 - 36839 (-)
Type: CAZyme
Location: 34404 - 36839 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp000435595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.