Cluster: HRGMv2_2258_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2258
- CGC Family ID: CGCFAM_00262
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2258_9 | HRGMv2_2258_9_14 | 12807 | 14933 | - | GH13_11 |
| TC | HRGMv2_2258_9 | HRGMv2_2258_9_15 | 14998 | 16851 | - | 3.A.1.120.6 |
| pfam | HRGMv2_2258_9 | HRGMv2_2258_9_16 | 16954 | 17709 | - | Exo_endo_phos |
| TC | HRGMv2_2258_9 | HRGMv2_2258_9_17 | 18040 | 19233 | - | 2.A.23.2.2 |
| pfam | HRGMv2_2258_9 | HRGMv2_2258_9_18 | 19635 | 20690 | + | DUF3829 |
| pfam | HRGMv2_2258_9 | HRGMv2_2258_9_19 | 20848 | 21780 | - | NTP_transferase |
| TC | HRGMv2_2258_9 | HRGMv2_2258_9_20 | 21856 | 23493 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_2258_9_14
Type: CAZyme
Location: 12807 - 14933 (-)
Type: CAZyme
Location: 12807 - 14933 (-)
Gene ID: HRGMv2_2258_9_15
Type: TC
Location: 14998 - 16851 (-)
Type: TC
Location: 14998 - 16851 (-)
Gene ID: HRGMv2_2258_9_16
Type: pfam
Location: 16954 - 17709 (-)
Type: pfam
Location: 16954 - 17709 (-)
Gene ID: HRGMv2_2258_9_17
Type: TC
Location: 18040 - 19233 (-)
Type: TC
Location: 18040 - 19233 (-)
Gene ID: HRGMv2_2258_9_18
Type: pfam
Location: 19635 - 20690 (+)
Type: pfam
Location: 19635 - 20690 (+)
Gene ID: HRGMv2_2258_9_19
Type: pfam
Location: 20848 - 21780 (-)
Type: pfam
Location: 20848 - 21780 (-)
Gene ID: HRGMv2_2258_9_20
Type: TC
Location: 21856 - 23493 (-)
Type: TC
Location: 21856 - 23493 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.